Information for motif1


Reverse Opposite:

p-value:1e-101
log p-value:-2.340e+02
Information Content per bp:1.530
Number of Target Sequences with motif164.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets495.7 +/- 453.6bp
Average Position of motif in Background643.3 +/- 506.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ATCCGTTCAGCA-----
--HWWGTCAGCAWWTTT

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ATCCGTTCAGCA--
--SCTGTCARCACC

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATCCGTTCAGCA-
NNCATTCATTCATNNN

MA0117.1_Mafb/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ATCCGTTCAGCA
---NCGTCAGC-

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ATCCGTTCAGCA
--TGAGTCAGCA

MA0496.1_MAFK/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATCCGTTCAGCA----
-CTGAGTCAGCAATTT

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ATCCGTTCAGCA
BRRCVGTTDN---

PB0046.1_Mybl1_1/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----ATCCGTTCAGCA
TTGAAAACCGTTAATTT

PH0126.1_Obox6/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----ATCCGTTCAGCA
CNATAATCCGNTTNT--

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATCCGTTCAGCA
TGTCGGTT-----