Information for motif15


Reverse Opposite:

p-value:1e-58
log p-value:-1.350e+02
Information Content per bp:1.956
Number of Target Sequences with motif163.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets431.6 +/- 390.4bp
Average Position of motif in Background476.0 +/- 266.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGGCATAGAG--
TATTATGGGATGGATAA

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------TGGCATAGAG
NGTAGGTTGGCATNNN-

MA0161.1_NFIC/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGCATAGAG
TTGGCA-----

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGGCATAGAG----
--GGTTAGAGACCT

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGGCATAGAG
CTTGGCAA----

PB0128.1_Gcm1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGGCATAGAG------
TGCGCATAGGGGAGGAG

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TGGCATAGAG
GGTCTGGCAT----

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------TGGCATAGAG
TNTAATTTGCATANNN

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------TGGCATAGAG
TNTAATTTGCATACNA

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGGCATAGAG-----
TTGGCANNNTGCCAAG