Information for motif19


Reverse Opposite:

p-value:1e-51
log p-value:-1.184e+02
Information Content per bp:1.968
Number of Target Sequences with motif189.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets448.4 +/- 377.7bp
Average Position of motif in Background578.0 +/- 404.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0502.1_NFYB/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTCATGGGTC-----
CTGATTGGTCNATTT

MA0060.2_NFYA/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CTCATGGGTC--
AGAGTGCTGATTGGTCCA

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTCATGGGTC
CCGATTGGCT

MA0058.2_MAX/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTCATGGGTC
AAGCACATGG---

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCATGGGTC-----
TCTCAAAGGTCACGAG

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CTCATGGGTC-
-----AGGTCA

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCATGGGTC------
CTCCAGGGGTCAATTGA

MA0154.2_EBF1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCATGGGTC
GTCCCCAGGGA-

MA0147.2_Myc/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTCATGGGTC
AAGCACATGG---

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCATGGGTC------
GGCGAGGGGTCAAGGGC