Information for motif2


Reverse Opposite:

p-value:1e-91
log p-value:-2.112e+02
Information Content per bp:1.612
Number of Target Sequences with motif154.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets440.2 +/- 425.8bp
Average Position of motif in Background94.7 +/- 63.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAGTACTACTAG-
CGAACAGTGCTCACTAT

POL002.1_INR/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAGTACTACTAG
TCAGTCTT-----

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CAGTACTACTAG-
TTCNAAGTACTTNNNNN

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAGTACTACTAG
CACAGN--------

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGTACTACTAG
CNGTCCTCCC--

PH0116.1_Nkx2-9/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CAGTACTACTAG-
TTTTAAGTACTTAAATT

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.51
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTACTACTAG
NNNNTGCCAGTGATTG---

PH0112.1_Nkx2-3/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CAGTACTACTAG
CNTTAAGTACTTAANG

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CAGTACTACTAG
TTAAGTGCTT----

PH0117.1_Nkx3-1/Jaspar

Match Rank:10
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----CAGTACTACTAG-
TACTAAGTACTTAAATG