| p-value: | 1e-50 |
| log p-value: | -1.163e+02 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 131.0 |
| Percentage of Target Sequences with motif | 0.10% |
| Number of Background Sequences with motif | 3.4 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 466.9 +/- 421.2bp |
| Average Position of motif in Background | 387.9 +/- 285.8bp |
| Strand Bias (log2 ratio + to - strand density) | 0.1 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
| Match Rank: | 1 |
| Score: | 0.77
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | CGTAATCCCA
--TAATCCCN |
|
|
|
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
| Match Rank: | 2 |
| Score: | 0.71
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | CGTAATCCCA
GCTAATCC-- |
|
|
|
PH0025.1_Dmbx1/Jaspar
| Match Rank: | 3 |
| Score: | 0.69
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CGTAATCCCA----
NNNATTAATCCGNTTNA |
|
|
|
PB0185.1_Tcf1_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.67
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CGTAATCCCA----
NNTAATCCNGNCNN |
|
|
|
PH0137.1_Pitx1/Jaspar
| Match Rank: | 5 |
| Score: | 0.67
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CGTAATCCCA----
NTTGTTAATCCCTCTNN |
|
|
|
PH0139.1_Pitx3/Jaspar
| Match Rank: | 6 |
| Score: | 0.66
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CGTAATCCCA--
GNNAGCTAATCCCCCN |
|
|
|
PH0130.1_Otx2/Jaspar
| Match Rank: | 7 |
| Score: | 0.66
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CGTAATCCCA---
GANNATTAATCCCTNNN |
|
|
|
PH0138.1_Pitx2/Jaspar
| Match Rank: | 8 |
| Score: | 0.66
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CGTAATCCCA---
GNNNATTAATCCCTNCN |
|
|
|
PH0124.1_Obox5_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.65
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CGTAATCCCA---
NANANTTAATCCCNNNN |
|
|
|
PH0129.1_Otx1/Jaspar
| Match Rank: | 10 |
| Score: | 0.65
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CGTAATCCCA---
NNNAATTAATCCCCNCN |
|
|
|
