Information for motif24


Reverse Opposite:

p-value:1e-46
log p-value:-1.069e+02
Information Content per bp:1.530
Number of Target Sequences with motif145.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets456.8 +/- 437.5bp
Average Position of motif in Background664.4 +/- 192.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGGCATGCTCG
AAGGCAAGTGT-

MA0088.1_znf143/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAGGCATGCTCG------
GCAAGGCATGATGGGAAATC

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGGCATGCTCG
CCWGGAATGY---

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAGGCATGCTCG-
CAAAGGCGTGGCCAG

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAGGCATGCTCG
NCTGGAATGC---

NRF1/Promoter/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAGGCATGCTCG-
-GCGCATGCGCAC

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAGGCATGCTCG
--GGCGCGCT--

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAGGCATGCTCG
-AGGCCTNG---

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAGGCATGCTCG-----
--AGTATTCTCGGTTGC

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AAGGCATGCTCG-----
--NNAATTCTCGNTNAN