Information for motif26


Reverse Opposite:

p-value:1e-42
log p-value:-9.810e+01
Information Content per bp:1.530
Number of Target Sequences with motif139.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets359.7 +/- 345.7bp
Average Position of motif in Background351.7 +/- 226.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.76
Offset:2
Orientation:forward strand
Alignment:TTAGGTGACA
--AGGTGTCA

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TTAGGTGACA--
--AGGTGTGAAM

MA0009.1_T/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTAGGTGACA-
CTAGGTGTGAA

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTAGGTGACA-----
TNNNNGGTGTCATNTNT

MA0025.1_NFIL3/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTAGGTGACA-
TTATGTAACAT

MA0595.1_SREBF1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTAGGTGACA
GTGGGGTGAT-

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTAGGTGACA--
--AGGTGTTAAT

MA0498.1_Meis1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTAGGTGACA---
NNNTGAGTGACAGCT

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTAGGTGACA-----
--AGGTGNCAGACAG

MA0526.1_USF2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTAGGTGACA
GTCATGTGACC