Information for motif32


Reverse Opposite:

p-value:1e-39
log p-value:-8.993e+01
Information Content per bp:1.530
Number of Target Sequences with motif167.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets536.3 +/- 438.0bp
Average Position of motif in Background811.2 +/- 364.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0100.2_Myb/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCGTAAATGCCA
--CCAACTGCCA

MA0485.1_Hoxc9/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCGTAAATGCCA
GGCCATAAATCAC-

MA0062.2_GABPA/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCGTAAATGCCA
CCGGAAGTGGC-

MA0161.1_NFIC/Jaspar

Match Rank:4
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CCGTAAATGCCA-
-------TGCCAA

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCGTAAATGCCA
ANGNAAAGGTCA

MA0076.2_ELK4/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCGTAAATGCCA
NCCGGAAGTGG--

NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCGTAAATGCCA
--GGAAATTCCC

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCGTAAATGCCA
RCCGGAARYN---

MA0158.1_HOXA5/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCGTAAATGCCA
-CACTAATT---

MA0107.1_RELA/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCGTAAATGCCA
--GGAAATTCCC