Information for motif39


Reverse Opposite:

p-value:1e-22
log p-value:-5.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif360.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif25.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets614.3 +/- 490.1bp
Average Position of motif in Background808.1 +/- 663.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0131.1_HINFP/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GGACGTCC
GCGGACGTTN

PB0027.1_Gmeb1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GGACGTCC-----
GAGTGTACGTAAGATGG

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGACGTCC
--ACGTCA

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGACGTCC
BGCACGTA-

MA0018.2_CREB1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGACGTCC
TGACGTCA

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGACGTCC
GGACGTGC

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGACGTCC
GGGTACGTGC

PB0004.1_Atf1_1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGACGTCC----
ACGATGACGTCATCGA

PB0094.1_Zfp128_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGACGTCC-----
TCTTTGGCGTACCCTAA

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGACGTCC-
NGATGACGTCAT