Information for motif43


Reverse Opposite:

p-value:1e-14
log p-value:-3.272e+01
Information Content per bp:1.530
Number of Target Sequences with motif161.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets532.6 +/- 457.5bp
Average Position of motif in Background832.7 +/- 425.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0036.1_Irf6_1/Jaspar

Match Rank:1
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------GTATCGGA---
NNNTTGGTTTCGNTNNN

PB0105.1_Arid3a_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GTATCGGA---
ACCCGTATCAAATTT

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTATCGGA----
NTGGTTTCGGTTNNN

PB0034.1_Irf4_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTATCGGA---
TNTGGTTTCGATACN

MA0028.1_ELK1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTATCGGA--
GAGCCGGAAG

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTATCGGA----
--RCCGGAARYN

MF0001.1_ETS_class/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTATCGGA--
--ACCGGAAG

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTATCGGA----
--DCCGGAARYN

MA0032.1_FOXC1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GTATCGGA
GGTAAGTA-----

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTATCGGA
TGGTTTCAGT