Information for motif44


Reverse Opposite:

p-value:1e-10
log p-value:-2.356e+01
Information Content per bp:1.920
Number of Target Sequences with motif834.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif81.2
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets543.9 +/- 462.5bp
Average Position of motif in Background699.0 +/- 516.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0094.1_Zfp128_1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGTACGCT-----
TTNGGGTACGCCNNANN

MA0032.1_FOXC1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGTACGCT--
--TACTNNNN

MA0030.1_FOXF2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGTACGCT--
NTTGTTTACGTTNN

PB0027.1_Gmeb1_1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGTACGCT------
GAGTGTACGTAAGATGG

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGTACGCT-
----NGCTN

Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TGTACGCT---
CCATTGTATGCAAAT

PH0067.1_Hoxc12/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TGTACGCT----
GNNNTTTTACGACCTNA

PH0077.1_Hoxd12/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TGTACGCT----
NNNATTTTACGACNNTN

MA0069.1_Pax6/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGTACGCT------
TTCACGCATGAGTT

PB0143.1_Klf7_2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TGTACGCT------
AAGCATACGCCCAACTT