Information for motif45


Reverse Opposite:

p-value:1e-7
log p-value:-1.636e+01
Information Content per bp:1.782
Number of Target Sequences with motif13625.0
Percentage of Target Sequences with motif10.70%
Number of Background Sequences with motif1598.6
Percentage of Background Sequences with motif10.26%
Average Position of motif in Targets436.6 +/- 413.1bp
Average Position of motif in Background479.6 +/- 442.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TGCATAGC-
----CAGCC

PH0148.1_Pou3f3/Jaspar

Match Rank:2
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------TGCATAGC--
TNNATTATGCATANNTT

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGCATAGC
ATTTGCATAT-

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGCATAGC------
CCGCATAGCAACGGA

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGCATAGC
ATTTGCATAA-

MA0033.1_FOXL1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGCATAGC
TATACATA--

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------TGCATAGC-
TNTAATTTGCATANNN

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------TGCATAGC-
TNTAATTTGCATACNA

MA0507.1_POU2F2/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TGCATAGC
TTCATTTGCATAT-

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGCATAGC------
TACCATAGCAACGGT