Information for motif48


Reverse Opposite:

p-value:1e0
log p-value:-1.400e-01
Information Content per bp:1.530
Number of Target Sequences with motif5230.0
Percentage of Target Sequences with motif4.11%
Number of Background Sequences with motif650.7
Percentage of Background Sequences with motif4.18%
Average Position of motif in Targets442.9 +/- 424.7bp
Average Position of motif in Background459.9 +/- 431.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TGTGTGTA----
NNNNTTTGTTTACNNT

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGTGTA---
NNGCGTGTGTGCNGCN

MA0481.1_FOXP1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTGTA------
CTTTGTTTACTTTTN

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTGTA------
NTNTATGTGCACATNNN

MA0593.1_FOXP2/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGTGTGTA---
TNTGTTTACTT

MA0032.1_FOXC1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGTGTGTA
GGTAAGTA

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGTGTGTA---
NYYTGTTTACHN

MA0479.1_FOXH1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGTGTGTA-----
--TGTGGATTNNN

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGTGTA---
NNNNTTGTGTGCTTNN

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGTGTGTA
TGCGTG--