Information for motif5


Reverse Opposite:

p-value:1e-67
log p-value:-1.556e+02
Information Content per bp:1.530
Number of Target Sequences with motif251.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets491.7 +/- 453.5bp
Average Position of motif in Background551.3 +/- 466.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0035.3_Gata1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CGCACAGACAAG--
---ANAGATAAGAA

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CGCACAGACAAG
---BCAGACWA-

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CGCACAGACAAG-
---CCAGACRSVB

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CGCACAGACAAG--
----CAGATAAGGN

MA0482.1_Gata4/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGCACAGACAAG-
--NNGAGATAAGA

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CGCACAGACAAG--
----NAGATAAGNN

MA0036.2_GATA2/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CGCACAGACAAG-----
---NCAGATAAGAANNN

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CGCACAGACAAG
---CCAGACAG-

MA0037.2_GATA3/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CGCACAGACAAG-
-----AGATAAGA

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CGCACAGACAAG---
----AAGGCAAGTGT