Information for motif6


Reverse Opposite:

p-value:1e-66
log p-value:-1.541e+02
Information Content per bp:1.525
Number of Target Sequences with motif195.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets456.9 +/- 400.9bp
Average Position of motif in Background1027.9 +/- 622.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAGACCCGCAGT--
CATAAGACCACCATTAC

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAGACCCGCAGT---
TCGTACCCGCATCATT

PB0201.1_Zfp281_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAGACCCGCAGT---
AGGAGACCCCCAATTTG

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AAGACCCGCAGT
------CACAGN

POL002.1_INR/Jaspar

Match Rank:5
Score:0.54
Offset:7
Orientation:forward strand
Alignment:AAGACCCGCAGT---
-------TCAGTCTT

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AAGACCCGCAGT------
-NNNANTGCAGTGCNNTT

MA0002.2_RUNX1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AAGACCCGCAGT-
--AAACCACAGAN

PB0020.1_Gabpa_1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AAGACCCGCAGT----
CAATACCGGAAGTGTAA

MA0524.1_TFAP2C/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAGACCCGCAGT---
CATGGCCCCAGGGCA

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AAGACCCGCAGT
---ANCAGCTG-