Information for motif31


Reverse Opposite:

p-value:1e-40
log p-value:-9.353e+01
Information Content per bp:1.530
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets147.5 +/- 82.2bp
Average Position of motif in Background60.9 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCCAAGGCCCGC
NTCAAGGTCA--

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCAAGGCCCGC---
ATAAAGGCGCGCGAT

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCAAGGCCCGC
BTCAAGGTCA--

MA0146.2_Zfx/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGGCCCGC
GGGGCCGAGGCCTG-

MA0505.1_Nr5a2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGGCCCGC
AAGTTCAAGGTCAGC

MA0161.1_NFIC/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAGGCCCGC
TGCCAA-------

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCAAGGCCCGC---
ATAAGGGCGCGCGAT

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCCAAGGCCCGC
--CTAGGCCT--

MA0131.1_HINFP/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCCAAGGCCCGC
--TAACGTCCGC

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCCAAGGCCCGC
--CNAGGCCT--