Information for motif5


Reverse Opposite:

p-value:1e-92
log p-value:-2.127e+02
Information Content per bp:1.689
Number of Target Sequences with motif197.0
Percentage of Target Sequences with motif4.25%
Number of Background Sequences with motif14.1
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets143.2 +/- 87.3bp
Average Position of motif in Background129.4 +/- 93.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0095.2_YY1/Jaspar

Match Rank:1
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---GCSATTTTGR
GCNGCCATCTTG-

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GCSATTTTGR
GCCGCCATCTTG-

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCSATTTTGR-
CCTTGCAATTTTTNN

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCSATTTTGR--
KCTATTTTTRGH

MA0497.1_MEF2C/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCSATTTTGR----
TTCTATTTTTAGNNN

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCSATTTTGR-
-CTATTTTTGG

MA0133.1_BRCA1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCSATTTTGR
---GTGTTGN

MA0052.2_MEF2A/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCSATTTTGR---
NNGCTATTTTTAGCN

MA0038.1_Gfi1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GCSATTTTGR
CNGTGATTTN--

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GCSATTTTGR--
NNNTGGCAGTTGGTNN