Information for motif28


Reverse Opposite:

p-value:1e-44
log p-value:-1.031e+02
Information Content per bp:1.686
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets163.9 +/- 84.3bp
Average Position of motif in Background161.8 +/- 51.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GAACCCTACG-
NNNNTTGACCCCTNNNN

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GAACCCTACG-
NNANTTGACCCCTNNNN

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GAACCCTACG-
TGTCGTGACCCCTTAAT

MA0074.1_RXRA::VDR/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAACCCTACG----
TGAACCCGATGACCC

MA0116.1_Zfp423/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAACCCTACG----
GCACCCCTGGGTGCC

PB0156.1_Plagl1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GAACCCTACG--
NNNNGGTACCCCCCANN

POL001.1_MTE/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GAACCCTACG-----
TTTCGAGCGGAACGGTCGC

PB0025.1_Glis2_1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GAACCCTACG--
TATCGACCCCCCACAG

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.53
Offset:-8
Orientation:forward strand
Alignment:--------GAACCCTACG
TATCATTAGAACGCT---

MA0057.1_MZF1_5-13/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GAACCCTACG
TTCCCCCTAC-