Information for motif24


Reverse Opposite:

p-value:1e-49
log p-value:-1.148e+02
Information Content per bp:1.530
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets152.8 +/- 79.9bp
Average Position of motif in Background184.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0162.2_EGR1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ACGCCGGGGGCG----
--GGCGGGGGCGGGGG

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACGCCGGGGGCG-----
NNNAAGGGGGCGGGNNN

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACGCCGGGGGCG--
ATTGCCTGAGGCAAT

PB0010.1_Egr1_1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACGCCGGGGGCG--
ANTGCGGGGGCGGN

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACGCCGGGGGCG--
ANTGCCTGAGGCAAN

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACGCCGGGGGCG-
CCCCCCCGGGGGGGT

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ACGCCGGGGGCG-
CCCCCCCGGGGGGGT

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACGCCGGGGGCG-
CACCCCCGGGGGGG

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACGCCGGGGGCG--
ATTGCCTGAGGCGAA

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ACGCCGGGGGCG--
--NGCGTGGGCGGR