Information for motif15


Reverse Opposite:

p-value:1e-63
log p-value:-1.462e+02
Information Content per bp:1.714
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets164.9 +/- 87.3bp
Average Position of motif in Background179.1 +/- 42.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0185.1_Tcf1_2/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CATAATCCGGCT--
NNTAATCCNGNCNN

PH0025.1_Dmbx1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CATAATCCGGCT--
NNNATTAATCCGNTTNA

PH0126.1_Obox6/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CATAATCCGGCT--
CNATAATCCGNTTNT

PB0077.1_Spdef_1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CATAATCCGGCT----
GTACATCCGGATTTTT

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CATAATCCGGCT
GCTAATCC----

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CATAATCCGGCT
--ACATCCTGNT

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CATAATCCGGCT
--TAATCCCN--

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CATAATCCGGCT
GNNAGCTAATCCCCCN

MA0028.1_ELK1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CATAATCCGGCT-
---CTTCCGGNNN

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CATAATCCGGCT
-NRYTTCCGGY-