Information for motif10


Reverse Opposite:

p-value:1e-72
log p-value:-1.662e+02
Information Content per bp:1.530
Number of Target Sequences with motif81.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets153.2 +/- 74.5bp
Average Position of motif in Background173.3 +/- 40.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGTTACTAGCGG---
GGGTTACTANAGGTCA

MA0494.1_Nr1h3::Rxra/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGTTACTAGCGG---
NNGAGGTTACTNNAGGTCA

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GGTTACTAGCGG-----
NTNNNNNGTTGCTANGGNNCANA

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGTTACTAGCGG
CTGTTGCTAGGS-

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGTTACTAGCGG-
NCCGTTGCTANGNGN

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGTTACTAGCGG-
NNCGTTGCTATGGNN

PH0032.1_Evx2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGTTACTAGCGG--
ANCGCTAATTAGCGGTN

PH0168.1_Hnf1b/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGTTACTAGCGG-
AGCTGTTAACTAGCCGT

PB0109.1_Bbx_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGTTACTAGCGG-
TGATTGTTAACAGTTGG

MA0510.1_RFX5/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGTTACTAGCGG-
NCTGTTGCCAGGGAG