Information for motif9


Reverse Opposite:

p-value:1e-76
log p-value:-1.763e+02
Information Content per bp:1.445
Number of Target Sequences with motif826.0
Percentage of Target Sequences with motif17.80%
Number of Background Sequences with motif199.2
Percentage of Background Sequences with motif9.06%
Average Position of motif in Targets144.4 +/- 87.1bp
Average Position of motif in Background154.1 +/- 115.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/Ifnb-Exp/Homer

Match Rank:1
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----CGAAAGTA
AGAAACGAAAGT-

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----CGAAAGTA
GAAAGTGAAAGT-

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CGAAAGTA--
TTGACCGAGAATTCC

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CGAAAGTA--
NNNACCGAGAGTNNN

MA0032.1_FOXC1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGAAAGTA
GGTAAGTA

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CGAAAGTA--
GNNACCGAGAATNNN

ETS(ETS)/Promoter/Homer

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CGAAAGTA
AACCGGAAGT-

MA0508.1_PRDM1/Jaspar

Match Rank:8
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CGAAAGTA-
AGAAAGTGAAAGTGA

PB0037.1_Isgf3g_1/Jaspar

Match Rank:9
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CGAAAGTA-
CAAAATCGAAACTAA

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGAAAGTA
ANCCGGAAGT-