Information for motif38


Reverse Opposite:

p-value:1e-29
log p-value:-6.686e+01
Information Content per bp:1.953
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets148.7 +/- 83.7bp
Average Position of motif in Background221.7 +/- 84.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0143.1_Klf7_2/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----AGGGCGTT-----
NNNTNGGGCGTATNNTN

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AGGGCGTT-
-GGCVGTTR

MA0131.1_HINFP/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCGTT-
GCGGACGTTN

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AGGGCGTT---
NNNAAGGGGGCGGGNNN

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGGCGTT--
TGGCAGTTGG

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCGTT
CTAGGCCT--

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGGGCGTT-----
CAAAGGCGTGGCCAG

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGGCGTT--
DGGGYGKGGC

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGGGCGTT-----
NNAGGGGCGGGGTNNA

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGGCGTT--
BRRCVGTTDN