Information for motif19


Reverse Opposite:

p-value:1e-58
log p-value:-1.352e+02
Information Content per bp:1.644
Number of Target Sequences with motif90.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets160.8 +/- 81.4bp
Average Position of motif in Background105.8 +/- 54.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0202.1_Zfp410_2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CTCCGCACCT----
TCACCCCGCCCCAAATT

PB0110.1_Bcl6b_2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CTCCGCACCT----
ATCCCCGCCCCTAAAA

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGCACCT------
NNTNCGCACCTGTNGAN

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTCCGCACCT
GGCCCCGCCCCC

MA0079.3_SP1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTCCGCACCT
GCCCCGCCCCC

MA0103.2_ZEB1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTCCGCACCT-
--CCTCACCTG

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTCCGCACCT
GCTCCG-----

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTCCGCACCT-
NAGCCCCGCCCCCN

MA0516.1_SP2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTCCGCACCT----
GCCCCGCCCCCTCCC

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTCCGCACCT---
TACGCCCCGCCACTCTG