Information for motif20


Reverse Opposite:

p-value:1e-58
log p-value:-1.342e+02
Information Content per bp:1.934
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets146.8 +/- 79.0bp
Average Position of motif in Background156.0 +/- 41.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0026.1_Duxbl/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----TTGATCGG----
NNNNGTTGATTGGGTCG

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TTGATCGG
NTATYGATCH-

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------TTGATCGG---
NNNNNATTGATGNGTGN

MA0151.1_ARID3A/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTGATCGG
TTTAAT---

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------TTGATCGG--
AATCCCTTTGATCTATC

MA0502.1_NFYB/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTGATCGG-------
CTGATTGGTCNATTT

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------TTGATCGG--
ATTTCCTTTGATCTATA

MA0070.1_PBX1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGATCGG---
TTTGATTGATGN

MA0060.2_NFYA/Jaspar

Match Rank:9
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------TTGATCGG----
AGAGTGCTGATTGGTCCA

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTGATCGG-----
-TGATTGGCTANN