Information for motif4


Reverse Opposite:

p-value:1e-108
log p-value:-2.488e+02
Information Content per bp:1.924
Number of Target Sequences with motif163.0
Percentage of Target Sequences with motif3.51%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets149.4 +/- 84.9bp
Average Position of motif in Background179.9 +/- 46.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.81
Offset:2
Orientation:forward strand
Alignment:AGTGACGC
--TGACGT

MA0018.2_CREB1/Jaspar

Match Rank:2
Score:0.76
Offset:2
Orientation:forward strand
Alignment:AGTGACGC--
--TGACGTCA

MA0067.1_Pax2/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AGTGACGC
NCGTGACN-

PB0108.1_Atf1_2/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGTGACGC-----
GAATGACGAATAAC

CRE(bZIP)/Promoter/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGTGACGC-----
-GTGACGTCACCG

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGTGACGC--
GATGACGTCA

PB0004.1_Atf1_1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGTGACGC------
ACGATGACGTCATCGA

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGTGACGC
CATGAC--

MA0122.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGTGACGC
TTAAGTGGA--

PB0038.1_Jundm2_1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGTGACGC------
NCGATGACGTCATCGN