Information for motif18


Reverse Opposite:

p-value:1e-60
log p-value:-1.386e+02
Information Content per bp:1.792
Number of Target Sequences with motif488.0
Percentage of Target Sequences with motif10.52%
Number of Background Sequences with motif102.4
Percentage of Background Sequences with motif4.66%
Average Position of motif in Targets146.4 +/- 84.0bp
Average Position of motif in Background154.8 +/- 96.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----AAAAGAAA----
GTTAAAAAAAAAAATTA

T1ISRE(IRF)/Ifnb-Exp/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AAAAGAAA--
AGAAACGAAAGT

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------AAAAGAAA
TACTGGAAAAAAAA

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---AAAAGAAA----
GGAAANTGAAACTNA

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----AAAAGAAA--
AGCCGAAAAAAAAAT

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AAAAGAAA---
GAGAACCGAAACTG

PB0116.1_Elf3_2/Jaspar

Match Rank:7
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----AAAAGAAA----
GTTCAAAAAAAAAATTC

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AAAAGAAA---
ATATCAAAACAAAACA

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAAAGAAA--
GAAASYGAAASY

PB0148.1_Mtf1_2/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAAAGAAA----
AAATAAGAAAAAAC