Information for motif16


Reverse Opposite:

p-value:1e-62
log p-value:-1.445e+02
Information Content per bp:1.530
Number of Target Sequences with motif124.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets148.3 +/- 77.9bp
Average Position of motif in Background150.8 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGAAGCGGGGTA------
-GCTGGGGGGTACCCCTT

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGAAGCGGGGTA
NGAAGC------

PB0025.1_Glis2_1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGAAGCGGGGTA----
NTNTGGGGGGTCNNNA

MA0048.1_NHLH1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CGAAGCGGGGTA
GCGCAGCTGCGT-

PH0126.1_Obox6/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGAAGCGGGGTA---
AAAAACGGATTATTG

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CGAAGCGGGGTA
CCACACAGCAGGAGA

MA0516.1_SP2/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CGAAGCGGGGTA
GGGNGGGGGCGGGGC-

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CGAAGCGGGGTA--
NNNNATGCGGGTNNNN

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CGAAGCGGGGTA
CGGAGC------

MA0079.3_SP1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CGAAGCGGGGTA
GGGGGCGGGGC-