Information for motif2


Reverse Opposite:

p-value:1e-116
log p-value:-2.672e+02
Information Content per bp:1.635
Number of Target Sequences with motif113.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets152.2 +/- 86.1bp
Average Position of motif in Background6.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0095.1_Zfp161_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGCCGCGCGCGC--
NCANGCGCGCGCGCCA

MA0146.2_Zfx/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGCCGCGCGCGC
CAGGCCNNGGCCNN

MA0506.1_NRF1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGCCGCGCGCGC-
--GCGCCTGCGCA

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGCCGCGCGCGC
GGCCCCGCCCCC

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGCCGCGCGCGC------
---NTCGCGCGCCTTNNN

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGCCGCGCGCGC------
---ANCGCGCGCCCTTNN

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGCCGCGCGCGC
AGGCCTAG-----

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGCCGCGCGCGC-
ATTGCCTCAGGCAAT

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGCCGCGCGCGC-
NTNGCCTCAGGCNNN

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCCGCGCGCGC-
NNGCNCTGCGCGGC