Information for motif13


Reverse Opposite:

p-value:1e-69
log p-value:-1.597e+02
Information Content per bp:1.530
Number of Target Sequences with motif100.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets144.3 +/- 82.5bp
Average Position of motif in Background158.1 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFX(?)/Promoter/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTGTCGGGAG-
ATTCTCGCGAGA

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTGTCGGGAG----
GTTCTCGCGAGANCC

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTCGGGAG-
GNNATTTGTCGTAANN

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTGTCGGGAG---
NNTNNTGTCTGGNNTNG

MA0470.1_E2F4/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTGTCGGGAG--
-GGGCGGGAAGG

MA0471.1_E2F6/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTGTCGGGAG--
-GGGCGGGAAGG

MA0469.1_E2F3/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTCGGGAG
NNGTGNGGGCGGGAG

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTGTCGGGAG---
-TGGCGGGAAAHB

MA0024.2_E2F1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTGTCGGGAG-
CGGGCGGGAGG

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTGTCGGGAG
CTGTCTGG--