Information for motif8


Reverse Opposite:

p-value:1e-76
log p-value:-1.772e+02
Information Content per bp:1.712
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets154.9 +/- 77.9bp
Average Position of motif in Background128.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0469.1_E2F3/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CGCCGGCCGGAG
NNGTGNGGGCGGGAG

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CGCCGGCCGGAG--
----GGCGGGAARN

MA0470.1_E2F4/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CGCCGGCCGGAG--
---GGGCGGGAAGG

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGCCGGCCGGAG
--CWGGCGGGAA

MA0471.1_E2F6/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CGCCGGCCGGAG--
---GGGCGGGAAGG

MA0024.2_E2F1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGCCGGCCGGAG-
--CGGGCGGGAGG

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CGCCGGCCGGAG-
-------CGGAGC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGCCGGCCGGAG
----GGGGGGGG

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGCCGGCCGGAG--
----GGCGGGAAAH

MA0162.2_EGR1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGCCGGCCGGAG
GGCGGGGGCGGGGG