Information for motif7


Reverse Opposite:

p-value:1e-37
log p-value:-8.546e+01
Information Content per bp:1.440
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets146.7 +/- 80.0bp
Average Position of motif in Background198.8 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAGTATATAG-
TATGTAAACANG

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAGTATATAG-----
ANNNGGATATATCCNNN

MA0047.2_Foxa2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GAGTATATAG
NCTAAGTAAACA-

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAGTATATAG
AAAGTAAACA-

Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GAGTATATAG-
NNNVCTGWGYAAACASN

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAGTATATAG
AAAGTAAACA-

MA0148.3_FOXA1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGTATATAG---
CAAAGTAAACANNNN

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGTATATAG-
AAGGATATNTN

MA0032.1_FOXC1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GAGTATATAG
GGTAAGTA-----

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGTATATAG-
ACAGGATGTGGT