Information for motif11


Reverse Opposite:

p-value:1e-27
log p-value:-6.416e+01
Information Content per bp:1.456
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets155.9 +/- 75.8bp
Average Position of motif in Background129.9 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.34
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0103.2_ZEB1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CTCACWCCTGSV
-CCTCACCTG--

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.74
Offset:2
Orientation:forward strand
Alignment:CTCACWCCTGSV
--NNCACCTGNN

MA0522.1_Tcf3/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CTCACWCCTGSV-
--CACAGCTGCAG

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTCACWCCTGSV---
NNTNCGCACCTGTNGAN

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTCACWCCTGSV
-NNACAGCTGC-

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCACWCCTGSV
-NAACAGCTGT-

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTCACWCCTGSV--
--CACAGCAGGGGG

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTCACWCCTGSV
----CAGCTGNT

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTCACWCCTGSV-
---NCAGCTGCTG

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCACWCCTGSV
-TGACACCT---