Information for motif13


Reverse Opposite:

p-value:1e-24
log p-value:-5.672e+01
Information Content per bp:1.670
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets155.9 +/- 85.7bp
Average Position of motif in Background142.6 +/- 43.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGTACTAGTC-
TTATGTACTAATAA

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGTACTAGTC
CTGTTCCTGG-

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGTACTAGTC---
CTAAGGTTCTAGATCAC

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGTACTAGTC-----
GAGCCCTTGTCCCTAA

MA0007.2_AR/Jaspar

Match Rank:5
Score:0.53
Offset:-8
Orientation:reverse strand
Alignment:--------TGTACTAGTC
GNACANNNTGTTCTT---

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------TGTACTAGTC
NNNNTTGTGTGCTTNN-

PH0040.1_Hmbox1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGTACTAGTC------
GAAAACTAGTTAACATC

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----TGTACTAGTC-
GATAACATCCTAGTAG

MA0160.1_NR4A2/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGTACTAGTC
GTGACCTT---

MA0072.1_RORA_2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGTACTAGTC---
TTGACCTANTTATN