Information for motif26


Reverse Opposite:

p-value:1e-12
log p-value:-2.969e+01
Information Content per bp:1.899
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets164.8 +/- 83.7bp
Average Position of motif in Background156.0 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.85
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0018.2_CREB1/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGAGGTCCMCG
-TGACGTCA---

CRE(bZIP)/Promoter/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGAGGTCCMCG
GTGACGTCACCG

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGAGGTCCMCG
-TGACGT-----

MA0003.2_TFAP2A/Jaspar

Match Rank:4
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CTGAGGTCCMCG
CATTGCCTCAGGGCA---

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTGAGGTCCMCG
GCCTCAGGGCAT--

MA0512.1_Rxra/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGAGGTCCMCG
CAAAGGTCAGA-

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTGAGGTCCMCG
SCCTSAGGSCAW--

PB0004.1_Atf1_1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTGAGGTCCMCG-
ACGATGACGTCATCGA

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CTGAGGTCCMCG
---AGGTCA---

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTGAGGTCCMCG-----
CATAAGACCACCATTAC