Information for motif32


Reverse Opposite:

p-value:1e-10
log p-value:-2.520e+01
Information Content per bp:1.530
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets178.8 +/- 85.2bp
Average Position of motif in Background124.5 +/- 73.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AGCTAGAC------
CAAATCCAGACATCACA

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGCTAGAC--
--CCAGACAG

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AGCTAGAC----
--CCAGACRSVB

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGCTAGAC--
--BCAGACWA

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGCTAGAC-
ATGCCAGACN

Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGCTAGAC-
AGGTGHCAGACA

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCTAGAC
CAGCC----

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGCTAGAC--
AGGTGNCAGACAG

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGCTAGAC------
NNGATCTAGAACCTNNN

MA0164.1_Nr2e3/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCTAGAC
AAGCTTG--