p-value: | 1e-28 |
log p-value: | -6.629e+01 |
Information Content per bp: | 1.704 |
Number of Target Sequences with motif | 30.0 |
Percentage of Target Sequences with motif | 1.15% |
Number of Background Sequences with motif | 2.4 |
Percentage of Background Sequences with motif | 0.06% |
Average Position of motif in Targets | 148.9 +/- 83.6bp |
Average Position of motif in Background | 247.7 +/- 40.2bp |
Strand Bias (log2 ratio + to - strand density) | -0.1 |
Multiplicity (# of sites on avg that occur together) | 1.57 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGGACAGTGAGG------ NGAGGTCANNGAGTTCANNN |
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Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer
Match Rank: | 2 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGGACAGTGAGG-- GTAGGTCACTGGGTCA |
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MA0007.2_AR/Jaspar
Match Rank: | 3 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGGACAGTGAGG-- AAGAACAGAATGTTC |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 4 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGGACAGTGAGG AAGGCAAGTGT-- |
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FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGGACAGTGAGG- NAGGTCANTGACCT |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 6 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGGACAGTGAGG CAAAGGTCAG----- |
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MA0515.1_Sox6/Jaspar
Match Rank: | 7 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGGACAGTGAGG AAAACAATGG-- |
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MA0160.1_NR4A2/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGGACAGTGAGG AAGGTCAC----- |
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MA0078.1_Sox17/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGGACAGTGAGG --GACAATGNN- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGACAGTGAGG AGGTCA------ |
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