Information for motif16


Reverse Opposite:

p-value:1e-22
log p-value:-5.171e+01
Information Content per bp:1.670
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets145.2 +/- 79.5bp
Average Position of motif in Background106.3 +/- 57.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----TTAACTAGGT---
GANGTTAACTAGTTTNN

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----TTAACTAGGT--
AGCTGTTAACTAGCCGT

MA0072.1_RORA_2/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TTAACTAGGT---
TATAAGTAGGTCAA

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------TTAACTAGGT-
ACTTAGTTAACTAAAAA

PB0159.1_Rfx4_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTAACTAGGT--
NNNGTAACTANGNNA

PH0147.1_Pou3f2/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TTAACTAGGT--
GATAATTAATTAGTTTG

PH0143.1_Pou2f1/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TTAACTAGGT-
ATATATTAATTAAGTA

PH0160.1_Shox2/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TTAACTAGGT---
CGCGTTAATTAATTGTG

PH0151.1_Pou6f1_1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TTAACTAGGT---
GACGATAATGAGCTTGC

PH0167.1_Tcf1/Jaspar

Match Rank:10
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------TTAACTAGGT-
CCTTAGTTAACTAAAAT