Information for motif30


Reverse Opposite:

p-value:1e-11
log p-value:-2.676e+01
Information Content per bp:1.706
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets166.9 +/- 78.7bp
Average Position of motif in Background159.0 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.87
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GATCCTGGTCAC
ACATCCTGNT---

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GATCCTGGTCAC---
CGCGCCGGGTCACGTA

MA0071.1_RORA_1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GATCCTGGTCAC
-ATCAAGGTCA-

PB0159.1_Rfx4_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GATCCTGGTCAC---
TACCCTAGTTACCGA

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GATCCTGGTCAC---
AGAGCGGGGTCAAGTA

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GATCCTGGTCAC---
GAGCCCTTGTCCCTAA

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GATCCTGGTCAC
-----AGGTCA-

MA0592.1_ESRRA/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GATCCTGGTCAC-
--CCAAGGTCACA

MA0480.1_Foxo1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GATCCTGGTCAC-
--TCCTGTTTACA

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GATCCTGGTCAC
--TCAAGGTCAN