Information for motif5


Reverse Opposite:

p-value:1e-37
log p-value:-8.643e+01
Information Content per bp:1.823
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets140.2 +/- 77.6bp
Average Position of motif in Background67.0 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TSAAGACCAG------
CATAAGACCACCATTAC

MA0505.1_Nr5a2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TSAAGACCAG-
AAGTTCAAGGTCAGC

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TSAAGACCAG
NTCAAGGTCA-

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TSAAGACCAG
BTCAAGGTCA-

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TSAAGACCAG---
---ATGCCAGACN

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TSAAGACCAG-----
NNAGGGACAAGGGCNC

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TSAAGACCAG-
-CCAGACRSVB

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TSAAGACCAG----
--NWAACCACADNN

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TSAAGACCAG
AGGTCAAGGTCA-

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TSAAGACCAG
-BCAGACWA-