Information for motif23


Reverse Opposite:

p-value:1e-15
log p-value:-3.463e+01
Information Content per bp:1.600
Number of Target Sequences with motif876.0
Percentage of Target Sequences with motif33.59%
Number of Background Sequences with motif996.2
Percentage of Background Sequences with motif26.53%
Average Position of motif in Targets150.4 +/- 84.7bp
Average Position of motif in Background147.2 +/- 133.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGAGGATC----
TAATGATGATCACTA

MA0479.1_FOXH1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGAGGATC---
TGTGGATTNNN

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGAGGATC--
NNTGTGGATTSS

MA0056.1_MZF1_1-4/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGAGGATC
TGGGGA--

MA0130.1_ZNF354C/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGAGGATC
-GTGGAT-

GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGAGGATC---
NAGATWNBNATCTNN

MA0124.1_NKX3-1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGAGGATC
TAAGTAT-

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGAGGATC
NNTGTGGTTT

POL005.1_DPE/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGAGGATC--
-GAAGATGTT

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TGAGGATC-----
---DGATCRATAN