Information for motif15


Reverse Opposite:

p-value:1e-23
log p-value:-5.417e+01
Information Content per bp:1.867
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets153.5 +/- 86.1bp
Average Position of motif in Background122.4 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.76
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0122.1_Nkx3-2/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GATCAGTGCA
-TTAAGTGGA

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GATCAGTGCA-----
AATCGCACTGCATTCCG

MA0130.1_ZNF354C/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GATCAGTGCA-
-----GTGGAT

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GATCAGTGCA------
NTNTATGTGCACATNNN

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GATCAGTGCA
AAATCACTGC-

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GATCAGTGCA------
NNGTATGTGCACATNNN

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GATCAGTGCA----
NTNNTTAAGTGGTTANN

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GATCAGTGCA------
CGAACAGTGCTCACTAT

FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GATCAGTGCA--
NAGGTCANTGACCT

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GATCAGTGCA
GGGTACGTGC-