Information for motif25


Reverse Opposite:

p-value:1e-13
log p-value:-3.184e+01
Information Content per bp:1.774
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets168.0 +/- 83.5bp
Average Position of motif in Background203.2 +/- 44.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GTAGGAGCCT
--AGGTGTCA

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTAGGAGCCT----
NTNNNAGGAGTCTCNTN

MA0009.1_T/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTAGGAGCCT-
CTAGGTGTGAA

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTAGGAGCCT
--CGGAGC--

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTAGGAGCCT---
CTACTAGGATGTNNTN

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTAGGAGCCT-----
AGCTCGGCGCCAAAAGC

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTAGGAGCCT----
GCGGAGGTGTCGCCTC

PB0128.1_Gcm1_2/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GTAGGAGCCT--
TGCGCATAGGGGAGGAG

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTAGGAGCCT
NNCAGGTGNN-

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GTAGGAGCCT----
NNNNTTGGCGCCGANNN