Information for motif29


Reverse Opposite:

p-value:1e-11
log p-value:-2.676e+01
Information Content per bp:1.746
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets135.3 +/- 91.4bp
Average Position of motif in Background167.2 +/- 55.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.81
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAAGAGTGGT------
NNANTGGTGGTCTTNNN

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAAGAGTGGT-
-TTGAGTGSTT

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAAGAGTGGT-----
TGCGGAGTGGGACTGG

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAGAGTGGT-------
GGCGAGGGGTCAAGGGC

MA0130.1_ZNF354C/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GAAGAGTGGT-
-----GTGGAT

MA0057.1_MZF1_5-13/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAAGAGTGGT--
--GGAGGGGGAA

MA0027.1_En1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAAGAGTGGT----
---AAGTAGTGCCC

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAAGAGTGGT
CTYRAGTGSY

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAAGAGTGGT-
CTTGAGTGGCT

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAAGAGTGGT---
-NNHTGTGGTTWN