Information for motif8


Reverse Opposite:

p-value:1e-30
log p-value:-6.988e+01
Information Content per bp:1.732
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets161.5 +/- 88.0bp
Average Position of motif in Background137.6 +/- 46.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.52
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0155.1_INSM1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGCATGGTGTAG
TGTCAGGGGGCG

PH0148.1_Pou3f3/Jaspar

Match Rank:2
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------TGCATGGTGTAG
AAAATATGCATAATAAA-

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGCATGGTGTAG----
GCGGAGGTGTCGCCTC

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:4
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------TGCATGGTGTAG-
GGAGCTGTCCATGGTGCTGA

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGCATGGTGTAG
TGCGTG------

MA0138.2_REST/Jaspar

Match Rank:6
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------TGCATGGTGTAG--
GGCGCTGTCCATGGTGCTGAA

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGCATGGTGTAG-
NNNCCATTGTGTNAN

MA0493.1_Klf1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TGCATGGTGTAG--
---TGGGTGTGGCN

MA0507.1_POU2F2/Jaspar

Match Rank:9
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------TGCATGGTGTAG
TTCATTTGCATAT-----

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TGCATGGTGTAG--
--NTGGGTGTGGCC