Information for motif24


Reverse Opposite:

p-value:1e-14
log p-value:-3.447e+01
Information Content per bp:1.682
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets143.9 +/- 73.3bp
Average Position of motif in Background157.9 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.63
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCTRGGTGCAGA--
ATCCACAGGTGCGAAAA

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCTRGGTGCAGA----
NTNTATGTGCACATNNN

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TCTRGGTGCAGA----
------TGCTGACTCA

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCTRGGTGCAGA------
-NNNANTGCAGTGCNNTT

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:5
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------TCTRGGTGCAGA
GGAGCTGTCCATGGTGCTGA

MA0117.1_Mafb/Jaspar

Match Rank:6
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TCTRGGTGCAGA---
-------GCTGACGC

MA0138.2_REST/Jaspar

Match Rank:7
Score:0.54
Offset:-8
Orientation:reverse strand
Alignment:--------TCTRGGTGCAGA-
GGCGCTGTCCATGGTGCTGAA

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCTRGGTGCAGA
NNCAGGTGNN--

MA0496.1_MAFK/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TCTRGGTGCAGA-----
--AAANTGCTGACTNAG

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TCTRGGTGCAGA----
----GGTGYTGACAGS