Homer de novo Motif Results (denovoHCC70//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 2253
Total background sequences = 105
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-485	-1.118e+03	21.71%	0.96%	12.0bp (0.0bp)	PB0133.1_Hic1_2/Jaspar(0.719) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-259	-5.970e+02	18.25%	2.52%	13.0bp (1.6bp)	MA0152.1_NFATC2/Jaspar(0.650) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-122	-2.811e+02	8.93%	0.97%	9.6bp (0.0bp)	MA0106.2_TP53/Jaspar(0.731) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-114	-2.640e+02	11.50%	2.29%	12.4bp (8.4bp)	Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer(0.974) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-88	-2.049e+02	16.07%	5.12%	13.3bp (10.5bp)	Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer(0.709) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-70	-1.631e+02	8.97%	2.22%	12.9bp (0.0bp)	Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer(0.822) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-68	-1.566e+02	8.79%	2.10%	12.0bp (4.8bp)	PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer(0.788) More Information \| Similar Motifs Found	motif file (matrix)
8		1e-57	-1.330e+02	10.08%	3.39%	11.6bp (10.8bp)	SD0002.1_at_AC_acceptor/Jaspar(0.648) More Information \| Similar Motifs Found	motif file (matrix)
9		1e-35	-8.286e+01	25.53%	15.77%	9.5bp (8.9bp)	MA0524.1_TFAP2C/Jaspar(0.543) More Information \| Similar Motifs Found	motif file (matrix)
10		1e-33	-7.774e+01	11.15%	4.81%	12.7bp (13.0bp)	Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer(0.837) More Information \| Similar Motifs Found	motif file (matrix)
11		1e-22	-5.230e+01	6.97%	3.07%	12.4bp (7.7bp)	PB0182.1_Srf_2/Jaspar(0.894) More Information \| Similar Motifs Found	motif file (matrix)
12		1e-20	-4.765e+01	3.46%	0.96%	11.4bp (0.0bp)	PH0044.1_Homez/Jaspar(0.667) More Information \| Similar Motifs Found	motif file (matrix)
13		1e-17	-4.089e+01	9.15%	4.79%	10.0bp (5.6bp)	PB0170.1_Sox17_2/Jaspar(0.530) More Information \| Similar Motifs Found	motif file (matrix)
14		1e-17	-3.993e+01	3.20%	0.00%	11.8bp (0.0bp)	PB0149.1_Myb_2/Jaspar(0.578) More Information \| Similar Motifs Found	motif file (matrix)
15		1e-16	-3.746e+01	3.11%	0.53%	11.6bp (0.0bp)	ZNF143\|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer(0.647) More Information \| Similar Motifs Found	motif file (matrix)
16		1e-15	-3.550e+01	12.52%	7.94%	12.7bp (13.8bp)	MA0056.1_MZF1_1-4/Jaspar(0.773) More Information \| Similar Motifs Found	motif file (matrix)
17		1e-14	-3.274e+01	4.53%	2.06%	11.3bp (2.4bp)	BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer(0.582) More Information \| Similar Motifs Found	motif file (matrix)
18		1e-13	-3.095e+01	4.44%	2.50%	12.3bp (12.1bp)	PB0099.1_Zfp691_1/Jaspar(0.758) More Information \| Similar Motifs Found	motif file (matrix)
19 *		1e0	-1.534e+00	3.15%	3.18%	12.2bp (11.2bp)	NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer(0.725) More Information \| Similar Motifs Found	motif file (matrix)