Homer de novo Motif Results (Motifs.3.Pro/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 2813
Total background sequences = 3565
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 1e-39-9.049e+011.39%0.08%360.9bp (146.2bp)PB0108.1_Atf1_2/Jaspar(0.742)
More Information | Similar Motifs Found		motif file (matrix)
2 1e-31-7.174e+010.96%0.06%208.6bp (215.3bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.780)
More Information | Similar Motifs Found		motif file (matrix)
3 1e-25-5.782e+010.82%0.04%338.9bp (572.6bp)MA0467.1_Crx/Jaspar(0.638)
More Information | Similar Motifs Found		motif file (matrix)
4 1e-24-5.666e+010.99%0.07%330.1bp (303.0bp)PH0130.1_Otx2/Jaspar(0.635)
More Information | Similar Motifs Found		motif file (matrix)
5 1e-22-5.250e+011.60%0.23%338.4bp (601.3bp)HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer(0.643)
More Information | Similar Motifs Found		motif file (matrix)
6 1e-22-5.111e+010.75%0.05%240.1bp (695.3bp)EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer(0.748)
More Information | Similar Motifs Found		motif file (matrix)
7 1e-20-4.798e+011.24%0.16%373.6bp (440.0bp)MA0039.2_Klf4/Jaspar(0.757)
More Information | Similar Motifs Found		motif file (matrix)
8 1e-19-4.458e+010.67%0.03%358.1bp (0.0bp)MA0089.1_NFE2L1::MafG/Jaspar(0.583)
More Information | Similar Motifs Found		motif file (matrix)
9 1e-19-4.440e+011.28%0.18%384.2bp (235.6bp)MF0003.1_REL_class/Jaspar(0.691)
More Information | Similar Motifs Found		motif file (matrix)
10 1e-18-4.359e+010.96%0.11%387.8bp (55.6bp)MA0469.1_E2F3/Jaspar(0.687)
More Information | Similar Motifs Found		motif file (matrix)
11 1e-18-4.263e+010.82%0.08%473.3bp (442.1bp)PB0191.1_Tcfap2c_2/Jaspar(0.678)
More Information | Similar Motifs Found		motif file (matrix)
12 1e-18-4.153e+011.31%0.21%318.9bp (456.9bp)Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.667)
More Information | Similar Motifs Found		motif file (matrix)
13 1e-16-3.822e+0114.81%9.80%374.5bp (468.0bp)POL002.1_INR/Jaspar(0.607)
More Information | Similar Motifs Found		motif file (matrix)
14 1e-15-3.585e+012.17%0.64%319.9bp (659.4bp)HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer(0.628)
More Information | Similar Motifs Found		motif file (matrix)
15 1e-15-3.573e+012.49%0.81%398.4bp (924.1bp)PB0150.1_Mybl1_2/Jaspar(0.680)
More Information | Similar Motifs Found		motif file (matrix)
16 1e-15-3.519e+010.57%0.04%307.4bp (200.2bp)MA0130.1_ZNF354C/Jaspar(0.645)
More Information | Similar Motifs Found		motif file (matrix)
17 1e-14-3.386e+0116.38%11.40%360.4bp (509.7bp)MA0483.1_Gfi1b/Jaspar(0.736)
More Information | Similar Motifs Found		motif file (matrix)
18 1e-14-3.336e+0117.55%12.44%445.6bp (582.0bp)MA0146.2_Zfx/Jaspar(0.639)
More Information | Similar Motifs Found		motif file (matrix)
19 1e-13-3.216e+010.67%0.07%317.6bp (445.0bp)MA0466.1_CEBPB/Jaspar(0.633)
More Information | Similar Motifs Found		motif file (matrix)
20 1e-13-3.177e+010.78%0.11%546.9bp (586.2bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.614)
More Information | Similar Motifs Found		motif file (matrix)
21 1e-13-3.149e+011.53%0.37%396.2bp (822.4bp)MA0018.2_CREB1/Jaspar(0.675)
More Information | Similar Motifs Found		motif file (matrix)
22 1e-13-3.135e+0114.25%9.77%371.2bp (417.1bp)Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer(0.639)
More Information | Similar Motifs Found		motif file (matrix)
23 *1e-11-2.747e+010.89%0.14%414.4bp (411.7bp)PB0044.1_Mtf1_1/Jaspar(0.619)
More Information | Similar Motifs Found		motif file (matrix)
24 *1e-11-2.726e+011.17%0.26%309.7bp (1044.5bp)PB0203.1_Zfp691_2/Jaspar(0.642)
More Information | Similar Motifs Found		motif file (matrix)
25 *1e-11-2.613e+011.88%0.62%421.1bp (884.0bp)MA0597.1_THAP1/Jaspar(0.617)
More Information | Similar Motifs Found		motif file (matrix)
26 *1e-11-2.578e+012.77%1.16%518.3bp (682.5bp)PB0024.1_Gcm1_1/Jaspar(0.616)
More Information | Similar Motifs Found		motif file (matrix)
27 *1e-10-2.500e+011.85%0.62%398.5bp (548.1bp)PB0076.1_Sp4_1/Jaspar(0.794)
More Information | Similar Motifs Found		motif file (matrix)
28 *1e-10-2.424e+010.75%0.13%437.8bp (173.7bp)Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer(0.792)
More Information | Similar Motifs Found		motif file (matrix)
29 *1e-10-2.401e+012.20%0.85%359.6bp (420.4bp)Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer(0.621)
More Information | Similar Motifs Found		motif file (matrix)
30 *1e-9-2.233e+010.71%0.13%498.9bp (203.2bp)MA0119.1_TLX1::NFIC/Jaspar(0.782)
More Information | Similar Motifs Found		motif file (matrix)
31 *1e-9-2.215e+011.17%0.34%345.2bp (326.3bp)PB0185.1_Tcf1_2/Jaspar(0.633)
More Information | Similar Motifs Found		motif file (matrix)
32 *1e-9-2.179e+0119.18%14.89%396.6bp (625.2bp)PB0167.1_Sox13_2/Jaspar(0.720)
More Information | Similar Motifs Found		motif file (matrix)
33 *1e-8-1.904e+010.85%0.20%317.5bp (196.8bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.738)
More Information | Similar Motifs Found		motif file (matrix)
34 *1e-8-1.867e+010.64%0.12%408.4bp (242.5bp)PB0199.1_Zfp161_2/Jaspar(0.656)
More Information | Similar Motifs Found		motif file (matrix)
35 *1e-7-1.759e+011.21%0.41%369.9bp (371.0bp)MA0111.1_Spz1/Jaspar(0.624)
More Information | Similar Motifs Found		motif file (matrix)
36 *1e-7-1.716e+010.53%0.11%395.9bp (359.5bp)MA0087.1_Sox5/Jaspar(0.615)
More Information | Similar Motifs Found		motif file (matrix)
37 *1e-7-1.705e+011.67%0.69%346.5bp (805.1bp)MA0470.1_E2F4/Jaspar(0.749)
More Information | Similar Motifs Found		motif file (matrix)
38 *1e-7-1.627e+011.31%0.49%344.6bp (272.7bp)Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer(0.657)
More Information | Similar Motifs Found		motif file (matrix)
39 *1e-6-1.492e+012.10%1.03%381.6bp (642.6bp)MA0131.1_HINFP/Jaspar(0.784)
More Information | Similar Motifs Found		motif file (matrix)
40 *1e-6-1.452e+011.95%0.95%475.8bp (639.3bp)POL012.1_TATA-Box/Jaspar(0.631)
More Information | Similar Motifs Found		motif file (matrix)
41 *1e-6-1.418e+0111.15%8.52%478.2bp (683.4bp)PB0025.1_Glis2_1/Jaspar(0.673)
More Information | Similar Motifs Found		motif file (matrix)
42 *1e-4-1.056e+013.55%2.31%452.6bp (464.8bp)MA0131.1_HINFP/Jaspar(0.642)
More Information | Similar Motifs Found		motif file (matrix)
43 *1e-4-9.971e+001.21%0.58%253.8bp (814.5bp)PB0139.1_Irf5_2/Jaspar(0.609)
More Information | Similar Motifs Found		motif file (matrix)
44 *1e-4-9.741e+0015.24%12.75%392.6bp (491.6bp)PB0182.1_Srf_2/Jaspar(0.853)
More Information | Similar Motifs Found		motif file (matrix)
45 *1e-3-8.564e+0029.09%26.12%432.0bp (624.0bp)p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer(0.624)
More Information | Similar Motifs Found		motif file (matrix)
46 *1e-3-7.192e+001.42%0.82%504.1bp (507.9bp)PB0147.1_Max_2/Jaspar(0.831)
More Information | Similar Motifs Found		motif file (matrix)
47 *1e-2-6.128e+000.75%0.39%400.2bp (213.5bp)MA0497.1_MEF2C/Jaspar(0.722)
More Information | Similar Motifs Found		motif file (matrix)
48 *1e-2-5.571e+001.78%1.20%451.9bp (509.6bp)MA0461.1_Atoh1/Jaspar(0.727)
More Information | Similar Motifs Found		motif file (matrix)
49 *1e-1-3.389e+000.60%0.38%491.0bp (550.5bp)FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer(0.615)
More Information | Similar Motifs Found		motif file (matrix)
50 *1e0-1.506e+006.47%6.10%481.1bp (828.9bp)PB0164.1_Smad3_2/Jaspar(0.680)
More Information | Similar Motifs Found		motif file (matrix)